int NumberTested
double[][] ROC
double[] Measured
double[] Predicted
double ROC_AUC
double class_cutoff
boolean discrete_class
int NumberCorrect
double FractionCorrect
double Kappa
int[][] ContingencyTable
int[][] ConfusionMatrix
int TP
int FP
int FN
int TN
double Sensitivity
double FPR
double Accuracy
double Specificity
double PPV
double NPV
double FDR
double MCC
double F1
java.lang.String[] ClassNames
boolean trained
int NEntries
java.util.List<E> AttributesUsed
int NClusters
int[] ClusterSize
double[][] ClusterMean
double[] AttributePower
int[] AttributeRanks
double Target
double Tolerance
double MaxWindowSize
int MaxCandidates
int NSteps
double[][] rankAnalysis
double[][] windowAnalysis
java.lang.String ModelName
BaseModel Model
Dataset ModelData
int NToSelect
BaseAttributeEvaluator Evaluator
boolean trained
BaseAttributeSelector AttributeSelector
ClustererStatistics Statistics
java.util.List<E> compoundLookup
java.util.List<E> CommonCompositionCopy
java.util.Comparator<T> CompositionComparatorCopy
java.util.List<E> ElemChoices
double MinDistance
int NComponents
double ElementProbability
int NElements
java.util.List<E> CommonCompositions
double[][] StructureProbability
java.lang.String[] ElementNames
java.util.Comparator<T> CompositionComparator
int NCompounds
java.util.SortedMap<K,V> PhaseDiagram
PhaseDiagramStatistics.CommonCompositions
corresponding to the composition of a compound in this diagram, x[1] is the index of the prototype of this compound in the list of prototypes
stored for that composition.java.util.List<E> permutations
java.util.Map<K,V> PhaseDiagram
PhaseDiagramStatistics.CommonCompositions
corresponding to the composition
of a compound in this diagram, x[1] is the index of the prototype of this compound in the list
of prototypes stored for that composition.double[] AttributeList
double Class
double[] Probability
double PredictedClass
boolean measured
boolean predicted
java.util.ArrayList<E> AttributeName
java.lang.String[] ClassName
java.util.ArrayList<E> Entries
java.util.List<E> Expanders
java.util.List<E> Generators
double[] MeasuredProperty
double[][] PredictedProperty
null
if this property has not been predicted.int TargetProperty
java.lang.String[] ElementNames
int[] SortingOrder
java.lang.String DataDirectory
java.util.List<E> ElementalProperties
java.util.SortedMap<K,V> PropertyData
double[][] OxidationStates
java.lang.String[] ElementNames
int[] SortingOrder
int[] Element
double[] Fraction
double NumberInCell
boolean HTMLFormat
java.lang.String LookupDirectory
java.util.List<E> ElementalProperties
java.util.Map<K,V> PropertyData
PrototypeSiteInformation SiteInfo
PrototypeSiteInformation SiteInfo
CompositionEntry[] SiteComp
java.util.Map<K,V> Phases
CompositionEntry CurrentComposition
double[] NAtoms
boolean[] IsIncluded
java.util.List<E> SiteGroup
java.util.List<E> equivalentArrangements
java.lang.String TargetAttribute
double Threshold
boolean Equal
boolean GreaterThan
boolean LessThan
BaseEntryRanker Ranker
int NPerDiagram
boolean UseMeasured
double Threshold
boolean Equal
boolean GreaterThan
boolean LessThan
CompositionEntry TargetComposition
double Threshold
int NumberToFilter
BaseEntryRanker Ranker
RobustRegressionUtility RobustUtility
int K
java.lang.String Target
boolean useMeasured
boolean insideRange
double lowerBound
double upperBound
GCLPCalculator GCLPCalculator
boolean UsePredicted
double Threshold
double Tolerance
boolean ScreenAttributes
boolean ScreenClass
double[] AttributeMean
double[] AttributeStdDev
double ClassMean
double ClassStdDev
boolean Trained
java.lang.String[] AttributeNames
BaseModel Model
boolean ComputeAbsolute
BaseDatasetSplitter splitter
GCLPCalculator GCLPCalculator
java.lang.String EnergyName
java.lang.String StabilityName
boolean Trained
boolean NormalizeAttributes
boolean NormalizeClass
java.lang.String[] AttributeNames
BaseClusterer Clusterer
boolean trainedPreviously
BaseModel Clfr
double ProbabilityThreshold
boolean SplitAbove
double Threshold
BaseEntryRanker objFun
BaseModel Clfr
double[] Edges
boolean trained
boolean validated
BaseStatistics TrainingStats
BaseStatistics ValidationStats
BaseAttributeSelector AttributeSelector
BaseDatasetNormalizer Normalizer
BaseDatasetFilter Filter
java.lang.String ValidationMethod
java.util.Date TrainTime
java.lang.String[] AttributeNames
java.util.ArrayList<E> Model
BaseDatasetSplitter Partitioner
BaseModel GenericModel
double[] ClassProbability
double[][][] Cumulants
int NComponents
int[] NBins
PhaseDiagramStatistics PhaseDiagramStats
ClassificationStatistics TrainingStatsPtr
ClassificationStatistics ValidationStatsPtr
int NClasses
java.lang.String[] ClassNames
weka.classifiers.AbstractClassifier Model
boolean model_defined
java.lang.String Model_Type
java.lang.String[] Model_Options
int MaxIter
java.util.List<E> VariableNames
java.util.List<E> FittingNames
int[] VariableIndices
java.util.List<E> InitialGuess
double[] FittedCoefficients
boolean initialized
BaseModel Clfr
BaseEntryRanker ObjFunction
double Threshold
double MinObjFun
double ObjFunRange
java.util.List<E> Model
BaseRegression GenericModel
int MaxNumberTerms
java.util.List<E> Terms
java.util.List<E> TermNames
java.util.List<E> Coefficients
double Intercept
BaseModel Submodel
double A
double B
java.lang.String PropertyName
double[] LookupTable
boolean UseInverse
double[] CorrectionFactors
boolean UseCorrection
java.util.List<E> FittedElements
java.util.List<E> FittedElementIndices
java.util.Map<K,V> Models
MultiObjectiveEntryRanker ObjFunction
BaseModel GenericModel
java.util.List<E> ScikitModel
int BufferSize
int CompressionLevel
java.util.List<E> Model
BaseRegression GenericModel
boolean PropogateAbsolute
weka.classifiers.AbstractClassifier Model
boolean model_defined
java.lang.String Model_Type
java.lang.String[] Model_Options
java.util.Set<E> SearchSpace
int CurrentIteration
int MaxIteration
Dataset InitialData
java.util.ArrayList<E> Candidates
BaseEntryRanker ObjectiveFunction
BaseOracle Oracle
boolean HasStarted
boolean PrintStatus
int EntriesPerGeneration
OptimizationStatistics Statistics
CompositeRegression Model
double RandomFraction
double WorstFraction
double RankingWeight
double MutationProbability
int NumberElite
BaseCrossoverFunction CrossoverFunction
BaseMutationFunction MutationFunction
int PreviousIterations
int AttemptsPerEntry
BaseDatasetFilter SuccessFilter
int NumberTopEntries
Dataset TopEntries
Dataset SuccessfulEntries
int IterationsEvaluated
int[] EvaluatedSoFar
int[] TopEntriesFound
boolean[] FoundAllTop
double[] GenerationAverage
double[] GenerationBest
double[] BestSoFar
int[] NSuccess
boolean[] FoundAllSuccess
Dataset ToEvaluate
private void readObject(java.io.ObjectInputStream in) throws java.io.IOException, java.lang.ClassNotFoundException
java.io.IOException
java.lang.ClassNotFoundException
private void writeObject(java.io.ObjectOutputStream out) throws java.io.IOException
java.io.IOException
java.lang.String name
java.util.Map<K,V> measuredProperties
java.util.Map<K,V> predictedProperties
java.util.Map<K,V> classProbs
private void readObject(java.io.ObjectInputStream in) throws java.io.IOException, java.lang.ClassNotFoundException
java.io.IOException
java.lang.ClassNotFoundException
private void writeObject(java.io.ObjectOutputStream out) throws java.io.IOException
java.io.IOException
java.lang.String why
private void readObject(java.io.ObjectInputStream in) throws java.io.IOException, java.lang.ClassNotFoundException
java.io.IOException
java.lang.ClassNotFoundException
private void writeObject(java.io.ObjectOutputStream out) throws java.io.IOException
java.io.IOException
java.util.List<E> entries
java.util.List<E> props
private void readObject(java.io.ObjectInputStream in) throws java.io.IOException, java.lang.ClassNotFoundException
java.io.IOException
java.lang.ClassNotFoundException
private void writeObject(java.io.ObjectOutputStream out) throws java.io.IOException
java.io.IOException
java.util.List<E> success
MagpieException ouch
private void readObject(java.io.ObjectInputStream in) throws java.io.IOException, java.lang.ClassNotFoundException
java.io.IOException
java.lang.ClassNotFoundException
private void writeObject(java.io.ObjectOutputStream out) throws java.io.IOException
java.io.IOException
private void readObject(java.io.ObjectInputStream in) throws java.io.IOException, java.lang.ClassNotFoundException
java.io.IOException
java.lang.ClassNotFoundException
private void writeObject(java.io.ObjectOutputStream out) throws java.io.IOException
java.io.IOException
java.util.Map<K,V> success
MagpieException ouch
private void readObject(java.io.ObjectInputStream in) throws java.io.IOException, java.lang.ClassNotFoundException
java.io.IOException
java.lang.ClassNotFoundException
private void writeObject(java.io.ObjectOutputStream out) throws java.io.IOException
java.io.IOException
double p
java.util.List<E> objs
java.lang.String genMethod
int numToList
byte __isset_bitfield
private void readObject(java.io.ObjectInputStream in) throws java.io.IOException, java.lang.ClassNotFoundException
java.io.IOException
java.lang.ClassNotFoundException
private void writeObject(java.io.ObjectOutputStream out) throws java.io.IOException
java.io.IOException
java.util.List<E> success
MagpieException ouch
private void readObject(java.io.ObjectInputStream in) throws java.io.IOException, java.lang.ClassNotFoundException
java.io.IOException
java.lang.ClassNotFoundException
private void writeObject(java.io.ObjectOutputStream out) throws java.io.IOException
java.io.IOException
java.lang.String obj
java.lang.String genMethod
int numToList
byte __isset_bitfield
private void readObject(java.io.ObjectInputStream in) throws java.io.IOException, java.lang.ClassNotFoundException
java.io.IOException
java.lang.ClassNotFoundException
private void writeObject(java.io.ObjectOutputStream out) throws java.io.IOException
java.io.IOException
java.util.List<E> success
MagpieException ouch
private void readObject(java.io.ObjectInputStream in) throws java.io.IOException, java.lang.ClassNotFoundException
java.io.IOException
java.lang.ClassNotFoundException
private void writeObject(java.io.ObjectOutputStream out) throws java.io.IOException
java.io.IOException
java.lang.String property
java.lang.String units
java.lang.String author
java.lang.String training
java.lang.String citation
java.lang.String notes
java.lang.String dataType
java.lang.String modelType
boolean classifier
java.util.Map<K,V> valScore
java.lang.String description
java.lang.String valMethod
java.lang.String trainTime
byte __isset_bitfield